DMCM2020 Poster sessions

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Thursday 12 November

10.50-11.10 Poster Session A

[doi: 10.5281/zenodo.4266707] From COVID-19 Disease Map molecular mechanisms to executable cell-specific logical models Viviam Bermúdez, Marco Fariñas, Eirini Tsirvouli and Martin Kuiper Discussion Room 1

[doi: 10.5281/zenodo.4267039] A comprehensive map of the SARS-CoV-2 replication cycle Marcio Acencio, Alexander Mazein, Hanna Borlinghaus, Tobias Czauderna, Falk Schreiber, Marek Ostaszewski and Reinhard Schneider Discussion Room 2

12.10-13.30 Poster Session B

[doi: 10.5281/zenodo.4266778] PhysiBoSS-COVID: the Boolean modelling of COVID-19 signalling pathways in a multicellular simulation framework allows for the uncovering of mechanistic insights Vincent Noel, José Carbonell, Miguel Ponce de Leon, Sylvain Soliman, Anna Niarakis, Laurence Calzone, Emmanuel Barillot, Alfonso Valencia and Arnau Montagud Meeting Room A

[doi: 10.5281/zenodo.4267247] COVID-19 Biomarkers in Research and Associations with Comorbidities Nikhita Gogate, Amanda Bell, Daniel Lyman, Robel Kahsay and Raja Mazumder Discussion Room 1

[doi: 10.5281/zenodo.4267215] A machine-built self-updating model of COVID-19 mechanisms Benjamin M. Gyori, John A. Bachman and Diana Kolusheva Discussion Room 2

[doi: 10.5281/zenodo.4266058] Drug repurposing for SARS-CoV-2 infection using machine learning and mechanistic models of the COVID-19 Disease Maps Carlos Loucera, Marina Esteban Medina, Kinza Rian, Matias M. Falco, Joaquin Dopazo and Maria Peña-Chilet Discussion Room 3

15.20-15.40 Poster Session C

[doi: 10.5281/zenodo.4267982] SARS-CoV-2 and the NLRP3 inflammasome Julia Somers, Ebru Kocakaya, Gokce Summak, Omur Bul, Emek Demir, Mehmet Altay Unal, Acelya Yilmazer and Can Akcali Discussion Room 1

[doi: 10.5281/zenodo.4267989] Immunometabolic strategies to combat COVID-19 inflammation Gökçe Yağmur Summak, Ebru Kocakaya, Omur Bul, Julia Somers, Mehmet Altay Ünal, Can Akcali, Acelya Yilmazer and Emek Demir Discussion Room 2

Friday 13 November

10.20-10.40 Poster Session D

[doi: 10.5281/zenodo.4265407] VSM: the intuitive, general-purpose curation technology
Steven Vercruysse
Discussion Room 1

[doi: 10.5281/zenodo.4266771] Computational modelling of the cellular interplay in Rheumatoid Arthritis. Deciphering the role of innate and adaptive immunity in cartilage destruction and bone erosion Naouel Zerrouk, Charles Bettembourg and Anna Niarakis Discussion Room 2

12.00-13.30 Poster Session E

[doi: 10.5281/zenodo.4266067]The role of the System Biology program in Health and Disease: from biological networks to modern medicine
Saveena Solanki
Meeting Room A

[doi: 10.5281/zenodo.4267832] Computational Modeling of the Metabolic Reprogramming in Rheumatoid Arthritis Synovial Fibroblasts and Cancer Associated Fibroblasts Sahar Aghakhani, Sylvain Soliman and Anna Niarakis Discussion Room 1

[doi: 10.5281/zenodo.4266347] Glial Scar Formation in CNS injury: A sub-map Salma Ramadan, Mohammed Ibrahim, Mohammed Alaa and Bassem Awad Discussion Room 2

[doi: 10.5281/zenodo.4266124] Combining bottom-up and top-down systems biology methods to obtain an integrative, global RA-specific network Quentin Miagoux, Dereck de Mézquita, Vidisha Singh, Smahane Chalabi, Elisabeth Petit-Teixeira and Anna Niarakis Discussion Room 3

14.50-15.10 Poster Session F

[doi: 10.5281/zenodo.4266860] LipoCanPredict: Multi-omics biomarker signatures identification in Cancer-Associated Adipocytes in Invasive Breast Cancer in obese patients Luis Cristobal Monraz Gomez, Inna Kuperstein and Emmanuel Barillot Discussion Room 1

[doi: 10.5281/zenodo.4268619] OmniPath: A resource for integrated intra- and intercellular signalling analysis Denes Turei, Alberto Valdeolivas, Lejla Potari-Gul, Nicolàs Palacio-Escat, Olga Ivanova, Attila Gábor, Dezso Modos, Tamas Korcsmaros and Julio Saez-Rodriguez Discussion Room 2